BigFix and Layering

BigFix works perfectly with our physical and dedicated VM environment, but recently we have been tasked with using Web Reports to show patch compliance with our UniDesk images. Currently we have the BES agent installed in the user layer and have some success with reports showing installed patches. We still see some inconsistency between what BigFix reports as relevant and what is already installed on machine.

I tired searching for anyone else with the same setup or similar issues but haven’t really found anything, does anyone here have some experience with BigFix and layering/Unidesk? Any advice will be greatly appreciated.

Thank you.